autora.theorist.darts.regressor

DARTSExecutionMonitor

A monitor of the execution of the DARTS algorithm.

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

class DARTSExecutionMonitor:
    """
    A monitor of the execution of the DARTS algorithm.
    """

    def __init__(self):
        """
        Initializes the execution monitor.
        """
        self.arch_weight_history = list()
        self.loss_history = list()
        self.epoch_history = list()
        self.primitives = list()

    def execution_monitor(
        self,
        network: Network,
        architect: Architect,
        epoch: int,
        **kwargs: Any,
    ):
        """
        A function to monitor the execution of the DARTS algorithm.

        Arguments:
            network: The DARTS network containing the weights each operation
                in the mixture architecture
            architect: The architect object used to construct the mixture architecture.
            epoch: The current epoch of the training.
            **kwargs: other parameters which may be passed from the DARTS optimizer
        """

        # collect data for visualization
        self.epoch_history.append(epoch)
        self.arch_weight_history.append(
            network.arch_parameters()[0].detach().numpy().copy()[np.newaxis, :]
        )
        self.loss_history.append(architect.current_loss)
        self.primitives = network.primitives

    def display(self):
        """
        A function to display the execution monitor. This function will generate two plots:
        (1) A plot of the training loss vs. epoch,
        (2) a plot of the architecture weights vs. epoch, divided into subplots by each edge
        in the mixture architecture.
        """

        loss_fig, loss_ax = plt.subplots(1, 1)
        loss_ax.plot(self.loss_history)

        loss_ax.set_ylabel("Loss", fontsize=14)
        loss_ax.set_xlabel("Epoch", fontsize=14)
        loss_ax.set_title("Training Loss")

        arch_weight_history_array = np.vstack(self.arch_weight_history)
        num_epochs, num_edges, num_primitives = arch_weight_history_array.shape

        subplots_per_side = int(np.ceil(np.sqrt(num_edges)))

        arch_fig, arch_axes = plt.subplots(
            subplots_per_side,
            subplots_per_side,
            sharex=True,
            sharey=True,
            figsize=(10, 10),
            squeeze=False,
        )

        arch_fig.suptitle("Architecture Weights", fontsize=10)

        for edge_i, ax in zip(range(num_edges), arch_axes.flat):
            for primitive_i in range(num_primitives):
                print(f"{edge_i}, {primitive_i}, {ax}")
                ax.plot(
                    arch_weight_history_array[:, edge_i, primitive_i],
                    label=f"{self.primitives[primitive_i]}",
                )

            ax.set_title("k{}".format(edge_i), fontsize=8)

            # there is no need to have the legend for each subplot
            if edge_i == 0:
                ax.legend(loc="upper center")
                ax.set_ylabel("Edge Weights", fontsize=8)
                ax.set_xlabel("Epoch", fontsize=8)

        return SimpleNamespace(
            loss_fig=loss_fig,
            loss_ax=loss_ax,
            arch_fig=arch_fig,
            arch_axes=arch_axes,
        )

__init__()

Initializes the execution monitor.

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def __init__(self):
    """
    Initializes the execution monitor.
    """
    self.arch_weight_history = list()
    self.loss_history = list()
    self.epoch_history = list()
    self.primitives = list()

display()

A function to display the execution monitor. This function will generate two plots: (1) A plot of the training loss vs. epoch, (2) a plot of the architecture weights vs. epoch, divided into subplots by each edge in the mixture architecture.

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def display(self):
    """
    A function to display the execution monitor. This function will generate two plots:
    (1) A plot of the training loss vs. epoch,
    (2) a plot of the architecture weights vs. epoch, divided into subplots by each edge
    in the mixture architecture.
    """

    loss_fig, loss_ax = plt.subplots(1, 1)
    loss_ax.plot(self.loss_history)

    loss_ax.set_ylabel("Loss", fontsize=14)
    loss_ax.set_xlabel("Epoch", fontsize=14)
    loss_ax.set_title("Training Loss")

    arch_weight_history_array = np.vstack(self.arch_weight_history)
    num_epochs, num_edges, num_primitives = arch_weight_history_array.shape

    subplots_per_side = int(np.ceil(np.sqrt(num_edges)))

    arch_fig, arch_axes = plt.subplots(
        subplots_per_side,
        subplots_per_side,
        sharex=True,
        sharey=True,
        figsize=(10, 10),
        squeeze=False,
    )

    arch_fig.suptitle("Architecture Weights", fontsize=10)

    for edge_i, ax in zip(range(num_edges), arch_axes.flat):
        for primitive_i in range(num_primitives):
            print(f"{edge_i}, {primitive_i}, {ax}")
            ax.plot(
                arch_weight_history_array[:, edge_i, primitive_i],
                label=f"{self.primitives[primitive_i]}",
            )

        ax.set_title("k{}".format(edge_i), fontsize=8)

        # there is no need to have the legend for each subplot
        if edge_i == 0:
            ax.legend(loc="upper center")
            ax.set_ylabel("Edge Weights", fontsize=8)
            ax.set_xlabel("Epoch", fontsize=8)

    return SimpleNamespace(
        loss_fig=loss_fig,
        loss_ax=loss_ax,
        arch_fig=arch_fig,
        arch_axes=arch_axes,
    )

execution_monitor(network, architect, epoch, **kwargs)

A function to monitor the execution of the DARTS algorithm.

Parameters:

Name	Type	Description	Default
network	Network	The DARTS network containing the weights each operation in the mixture architecture	required
architect	Architect	The architect object used to construct the mixture architecture.	required
epoch	int	The current epoch of the training.	required
**kwargs	Any	other parameters which may be passed from the DARTS optimizer	{}

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def execution_monitor(
    self,
    network: Network,
    architect: Architect,
    epoch: int,
    **kwargs: Any,
):
    """
    A function to monitor the execution of the DARTS algorithm.

    Arguments:
        network: The DARTS network containing the weights each operation
            in the mixture architecture
        architect: The architect object used to construct the mixture architecture.
        epoch: The current epoch of the training.
        **kwargs: other parameters which may be passed from the DARTS optimizer
    """

    # collect data for visualization
    self.epoch_history.append(epoch)
    self.arch_weight_history.append(
        network.arch_parameters()[0].detach().numpy().copy()[np.newaxis, :]
    )
    self.loss_history.append(architect.current_loss)
    self.primitives = network.primitives

DARTSRegressor

Bases: BaseEstimator, RegressorMixin

Differentiable ARchiTecture Search Regressor.

DARTS finds a composition of functions and coefficients to minimize a loss function suitable for the dependent variable.

This class is intended to be compatible with the Scikit-Learn Estimator API.

Examples:

>>> import numpy as np
>>> num_samples = 1000
>>> X = np.linspace(start=0, stop=1, num=num_samples).reshape(-1, 1)
>>> y = 15. * np.ones(num_samples)
>>> estimator = DARTSRegressor(num_graph_nodes=1)
>>> estimator = estimator.fit(X, y)
>>> estimator.predict([[0.5]])
array([[15.051043]], dtype=float32)

Attributes:

Name	Type	Description
network_	Optional[Network]	represents the optimized network for the architecture search, without the output function
model_	Optional[Network]	represents the best-fit model including the output function after sampling of the network to pick a single computation graph. By default, this is the computation graph with the maximum weights, but can be set to a graph based on a sample on the edge weights by running the resample_model(sample_strategy="sample") method. It can be reset by running the resample_model(sample_strategy="max") method.

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

class DARTSRegressor(BaseEstimator, RegressorMixin):
    """
    Differentiable ARchiTecture Search Regressor.

    DARTS finds a composition of functions and coefficients to minimize a loss function suitable for
    the dependent variable.

    This class is intended to be compatible with the
    [Scikit-Learn Estimator API](https://scikit-learn.org/stable/developers/develop.html).

    Examples:

        >>> import numpy as np
        >>> num_samples = 1000
        >>> X = np.linspace(start=0, stop=1, num=num_samples).reshape(-1, 1)
        >>> y = 15. * np.ones(num_samples)
        >>> estimator = DARTSRegressor(num_graph_nodes=1)
        >>> estimator = estimator.fit(X, y)
        >>> estimator.predict([[0.5]])
        array([[15.051043]], dtype=float32)


    Attributes:
        network_: represents the optimized network for the architecture search, without the
            output function
        model_: represents the best-fit model including the output function
            after sampling of the network to pick a single computation graph.
            By default, this is the computation graph with the maximum weights,
            but can be set to a graph based on a sample on the edge weights
            by running the `resample_model(sample_strategy="sample")` method.
            It can be reset by running the `resample_model(sample_strategy="max")` method.



    """

    def __init__(
        self,
        batch_size: int = 64,
        num_graph_nodes: int = 2,
        output_type: IMPLEMENTED_OUTPUT_TYPES = "real",
        classifier_weight_decay: float = 1e-2,
        darts_type: IMPLEMENTED_DARTS_TYPES = "original",
        init_weights_function: Optional[Callable] = None,
        param_updates_per_epoch: int = 10,
        param_updates_for_sampled_model: int = 100,
        param_learning_rate_max: float = 2.5e-2,
        param_learning_rate_min: float = 0.01,
        param_momentum: float = 9e-1,
        param_weight_decay: float = 3e-4,
        arch_updates_per_epoch: int = 1,
        arch_learning_rate_max: float = 3e-3,
        arch_weight_decay: float = 1e-4,
        arch_weight_decay_df: float = 3e-4,
        arch_weight_decay_base: float = 0.0,
        arch_momentum: float = 9e-1,
        fair_darts_loss_weight: int = 1,
        max_epochs: int = 10,
        grad_clip: float = 5,
        primitives: Sequence[str] = PRIMITIVES,
        train_classifier_coefficients: bool = False,
        train_classifier_bias: bool = False,
        execution_monitor: Callable = (lambda *args, **kwargs: None),
        sampling_strategy: SAMPLING_STRATEGIES = "max",
    ) -> None:
        """
        Initializes the DARTSRegressor.

        Arguments:
            batch_size: Batch size for the data loader.
            num_graph_nodes: Number of nodes in the desired computation graph.
            output_type: Type of output function to use. This function is applied to transform
                the output of the mixture architecture.
            classifier_weight_decay: Weight decay for the classifier.
            darts_type: Type of DARTS to use ('original' or 'fair').
            init_weights_function: Function to initialize the parameters of each operation.
            param_updates_per_epoch: Number of updates to perform per epoch.
                for the operation parameters.
            param_learning_rate_max: Initial (maximum) learning rate for the operation parameters.
            param_learning_rate_min: Final (minimum) learning rate for the operation parameters.
            param_momentum: Momentum for the operation parameters.
            param_weight_decay: Weight decay for the operation parameters.
            arch_updates_per_epoch: Number of architecture weight updates to perform per epoch.
            arch_learning_rate_max: Initial (maximum) learning rate for the architecture.
            arch_weight_decay: Weight decay for the architecture weights.
            arch_weight_decay_df: An additional weight decay that scales with the number of
                parameters (degrees of freedom) in the operation. The higher this weight decay,
                the more DARTS will prefer simple operations.
            arch_weight_decay_base: A base weight decay that is added to the scaled weight decay.
                arch_momentum: Momentum for the architecture weights.
            fair_darts_loss_weight: Weight of the loss in fair darts which forces architecture
                weights to become either 0 or 1.
            max_epochs: Maximum number of epochs to train for.
            grad_clip: Gradient clipping value for updating the parameters of the operations.
            primitives: List of primitives (operations) to use.
            train_classifier_coefficients: Whether to train the coefficients of the classifier.
            train_classifier_bias: Whether to train the bias of the classifier.
            execution_monitor: Function to monitor the execution of the model.
            primitives: list of primitive operations used in the DARTS network,
                e.g., 'add', 'subtract', 'none'. For details, see
                [`autora.theorist.darts.operations`][autora.theorist.darts.operations]
        """

        self.batch_size = batch_size

        self.num_graph_nodes = num_graph_nodes
        self.classifier_weight_decay = classifier_weight_decay
        self.darts_type = darts_type
        self.init_weights_function = init_weights_function

        self.param_updates_per_epoch = param_updates_per_epoch
        self.param_updates_for_sampled_model = param_updates_for_sampled_model

        self.param_learning_rate_max = param_learning_rate_max
        self.param_learning_rate_min = param_learning_rate_min
        self.param_momentum = param_momentum
        self.arch_momentum = arch_momentum
        self.param_weight_decay = param_weight_decay

        self.arch_updates_per_epoch = arch_updates_per_epoch
        self.arch_weight_decay = arch_weight_decay
        self.arch_weight_decay_df = arch_weight_decay_df
        self.arch_weight_decay_base = arch_weight_decay_base
        self.arch_learning_rate_max = arch_learning_rate_max
        self.fair_darts_loss_weight = fair_darts_loss_weight

        self.max_epochs = max_epochs
        self.grad_clip = grad_clip

        self.primitives = primitives

        self.output_type = output_type
        self.darts_type = darts_type

        self.X_: Optional[np.ndarray] = None
        self.y_: Optional[np.ndarray] = None
        self.network_: Optional[Network] = None
        self.model_: Optional[Network] = None

        self.train_classifier_coefficients = train_classifier_coefficients
        self.train_classifier_bias = train_classifier_bias

        self.execution_monitor = execution_monitor

        self.sampling_strategy = sampling_strategy

    def fit(self, X: np.ndarray, y: np.ndarray):
        """
        Runs the optimization for a given set of `X`s and `y`s.

        Arguments:
            X: independent variables in an n-dimensional array
            y: dependent variables in an n-dimensional array

        Returns:
            self (DARTSRegressor): the fitted estimator
        """

        if self.output_type == "class":
            raise NotImplementedError(
                "Classification not implemented for DARTSRegressor."
            )

        params = self.get_params()

        fit_results = _general_darts(X=X, y=y, network=self.network_, **params)
        self.X_ = X
        self.y_ = y
        self.network_ = fit_results.network
        self.model_ = fit_results.model
        return self

    def predict(self, X: np.ndarray) -> np.ndarray:
        """
        Applies the fitted model to a set of independent variables `X`,
        to give predictions for the dependent variable `y`.

        Arguments:
            X: independent variables in an n-dimensional array

        Returns:
            y: predicted dependent variable values
        """
        X_ = check_array(X)

        # First run the checks using the scikit-learn API, listing the key parameters
        check_is_fitted(self, attributes=["model_"])

        # Since self.model_ is initialized as None, mypy throws an error if we
        # just call self.model_(X) in the predict method, as it could still be none.
        # MyPy doesn't understand that the sklearn check_is_fitted function
        # ensures the self.model_ parameter is initialized and otherwise throws an error,
        # so we check that explicitly here and pass the model which can't be None.
        assert self.model_ is not None

        y_ = self.model_(torch.as_tensor(X_).float())
        y = y_.detach().numpy()

        return y

    def visualize_model(
        self,
        input_labels: Optional[Sequence[str]] = None,
    ):
        """
        Visualizes the model architecture as a graph.

        Arguments:
            input_labels: labels for the input nodes

        """

        check_is_fitted(self, attributes=["model_"])
        assert self.model_ is not None
        fitted_sampled_network = self.model_[0]

        genotype = Network.genotype(fitted_sampled_network).normal
        (
            _,
            _,
            param_list,
        ) = fitted_sampled_network.count_parameters()

        if input_labels is not None:
            input_labels_ = tuple(input_labels)
        else:
            input_labels_ = self._get_input_labels()

        assert self.y_ is not None
        out_dim = 1 if self.y_.ndim == 1 else self.y_.shape[1]

        out_func = get_output_str(ValueType(self.output_type))

        # call to plot function
        graph = darts_model_plot(
            genotype=genotype,
            input_labels=input_labels_,
            param_list=param_list,
            full_label=True,
            out_dim=out_dim,
            out_fnc=out_func,
        )

        return graph

    def _get_input_labels(self):
        """
        Returns the input labels for the model.

        Returns:
            input_labels: labels for the input nodes

        """
        return self._get_labels(self.X_, "x")

    def _get_output_labels(self):
        """
        Returns the output labels for the model.

        Returns:
            output_labels: labels for the output nodes

        """
        return self._get_labels(self.y_, "y")

    def _get_labels(
        self, data: Optional[np.ndarray], default_label: str
    ) -> Sequence[str]:
        """
        Returns the labels for the model.

        Arguments:
            data: data to get labels for
            default_label: default label to use if no labels are provided

        Returns:
            labels: labels for the model

        """
        assert data is not None

        if hasattr(data, "columns"):  # it's a dataframe with column names
            labels_ = tuple(data.columns)
        elif (
            hasattr(data, "name") and len(data.shape) == 1
        ):  # it's a single series with a single name
            labels_ = (data.name,)

        else:
            dim = 1 if data.ndim == 1 else data.shape[1]
            labels_ = tuple(f"{default_label}{i+1}" for i in range(dim))
        return labels_

    def model_repr(
        self,
        input_labels: Optional[Sequence[str]] = None,
        output_labels: Optional[Sequence[str]] = None,
        output_function_label: str = "",
        decimals_to_display: int = 2,
        output_format: Literal["latex", "console"] = "console",
    ) -> str:
        """
        Prints the equations of the model architecture.

        Args:
            input_labels: which names to use for the independent variables (X)
            output_labels: which names to use for the dependent variables (y)
            output_function_label: name to use for the output transformation
            decimals_to_display: amount of rounding for the coefficient values
            output_format: whether the output should be formatted for
                the command line (`console`) or as equations in a latex file (`latex`)

        Returns:
            The equations of the model architecture

        """
        assert self.model_ is not None
        fitted_sampled_network: Network = self.model_[0]

        if input_labels is None:
            input_labels_ = self._get_input_labels()
        else:
            input_labels_ = input_labels

        if output_labels is None:
            output_labels_ = self._get_output_labels()
        else:
            output_labels_ = output_labels

        edge_list = fitted_sampled_network.architecture_to_str_list(
            input_labels=input_labels_,
            output_labels=output_labels_,
            output_function_label=output_function_label,
            decimals_to_display=decimals_to_display,
            output_format=output_format,
        )

        model_repr_ = "\n".join(["Model:"] + edge_list)
        return model_repr_

__init__(batch_size=64, num_graph_nodes=2, output_type='real', classifier_weight_decay=0.01, darts_type='original', init_weights_function=None, param_updates_per_epoch=10, param_updates_for_sampled_model=100, param_learning_rate_max=0.025, param_learning_rate_min=0.01, param_momentum=0.9, param_weight_decay=0.0003, arch_updates_per_epoch=1, arch_learning_rate_max=0.003, arch_weight_decay=0.0001, arch_weight_decay_df=0.0003, arch_weight_decay_base=0.0, arch_momentum=0.9, fair_darts_loss_weight=1, max_epochs=10, grad_clip=5, primitives=PRIMITIVES, train_classifier_coefficients=False, train_classifier_bias=False, execution_monitor=lambda *args, **kwargs: None, sampling_strategy='max')

Initializes the DARTSRegressor.

Parameters:

Name	Type	Description	Default
batch_size	int	Batch size for the data loader.	64
num_graph_nodes	int	Number of nodes in the desired computation graph.	2
output_type	IMPLEMENTED_OUTPUT_TYPES	Type of output function to use. This function is applied to transform the output of the mixture architecture.	'real'
classifier_weight_decay	float	Weight decay for the classifier.	0.01
darts_type	IMPLEMENTED_DARTS_TYPES	Type of DARTS to use ('original' or 'fair').	'original'
init_weights_function	Optional[Callable]	Function to initialize the parameters of each operation.	None
param_updates_per_epoch	int	Number of updates to perform per epoch. for the operation parameters.	10
param_learning_rate_max	float	Initial (maximum) learning rate for the operation parameters.	0.025
param_learning_rate_min	float	Final (minimum) learning rate for the operation parameters.	0.01
param_momentum	float	Momentum for the operation parameters.	0.9
param_weight_decay	float	Weight decay for the operation parameters.	0.0003
arch_updates_per_epoch	int	Number of architecture weight updates to perform per epoch.	1
arch_learning_rate_max	float	Initial (maximum) learning rate for the architecture.	0.003
arch_weight_decay	float	Weight decay for the architecture weights.	0.0001
arch_weight_decay_df	float	An additional weight decay that scales with the number of parameters (degrees of freedom) in the operation. The higher this weight decay, the more DARTS will prefer simple operations.	0.0003
arch_weight_decay_base	float	A base weight decay that is added to the scaled weight decay. arch_momentum: Momentum for the architecture weights.	0.0
fair_darts_loss_weight	int	Weight of the loss in fair darts which forces architecture weights to become either 0 or 1.	1
max_epochs	int	Maximum number of epochs to train for.	10
grad_clip	float	Gradient clipping value for updating the parameters of the operations.	5
primitives	Sequence[str]	List of primitives (operations) to use.	PRIMITIVES
train_classifier_coefficients	bool	Whether to train the coefficients of the classifier.	False
train_classifier_bias	bool	Whether to train the bias of the classifier.	False
execution_monitor	Callable	Function to monitor the execution of the model.	lambda *args, **kwargs: None
primitives	Sequence[str]	list of primitive operations used in the DARTS network, e.g., 'add', 'subtract', 'none'. For details, see autora.theorist.darts.operations	PRIMITIVES

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def __init__(
    self,
    batch_size: int = 64,
    num_graph_nodes: int = 2,
    output_type: IMPLEMENTED_OUTPUT_TYPES = "real",
    classifier_weight_decay: float = 1e-2,
    darts_type: IMPLEMENTED_DARTS_TYPES = "original",
    init_weights_function: Optional[Callable] = None,
    param_updates_per_epoch: int = 10,
    param_updates_for_sampled_model: int = 100,
    param_learning_rate_max: float = 2.5e-2,
    param_learning_rate_min: float = 0.01,
    param_momentum: float = 9e-1,
    param_weight_decay: float = 3e-4,
    arch_updates_per_epoch: int = 1,
    arch_learning_rate_max: float = 3e-3,
    arch_weight_decay: float = 1e-4,
    arch_weight_decay_df: float = 3e-4,
    arch_weight_decay_base: float = 0.0,
    arch_momentum: float = 9e-1,
    fair_darts_loss_weight: int = 1,
    max_epochs: int = 10,
    grad_clip: float = 5,
    primitives: Sequence[str] = PRIMITIVES,
    train_classifier_coefficients: bool = False,
    train_classifier_bias: bool = False,
    execution_monitor: Callable = (lambda *args, **kwargs: None),
    sampling_strategy: SAMPLING_STRATEGIES = "max",
) -> None:
    """
    Initializes the DARTSRegressor.

    Arguments:
        batch_size: Batch size for the data loader.
        num_graph_nodes: Number of nodes in the desired computation graph.
        output_type: Type of output function to use. This function is applied to transform
            the output of the mixture architecture.
        classifier_weight_decay: Weight decay for the classifier.
        darts_type: Type of DARTS to use ('original' or 'fair').
        init_weights_function: Function to initialize the parameters of each operation.
        param_updates_per_epoch: Number of updates to perform per epoch.
            for the operation parameters.
        param_learning_rate_max: Initial (maximum) learning rate for the operation parameters.
        param_learning_rate_min: Final (minimum) learning rate for the operation parameters.
        param_momentum: Momentum for the operation parameters.
        param_weight_decay: Weight decay for the operation parameters.
        arch_updates_per_epoch: Number of architecture weight updates to perform per epoch.
        arch_learning_rate_max: Initial (maximum) learning rate for the architecture.
        arch_weight_decay: Weight decay for the architecture weights.
        arch_weight_decay_df: An additional weight decay that scales with the number of
            parameters (degrees of freedom) in the operation. The higher this weight decay,
            the more DARTS will prefer simple operations.
        arch_weight_decay_base: A base weight decay that is added to the scaled weight decay.
            arch_momentum: Momentum for the architecture weights.
        fair_darts_loss_weight: Weight of the loss in fair darts which forces architecture
            weights to become either 0 or 1.
        max_epochs: Maximum number of epochs to train for.
        grad_clip: Gradient clipping value for updating the parameters of the operations.
        primitives: List of primitives (operations) to use.
        train_classifier_coefficients: Whether to train the coefficients of the classifier.
        train_classifier_bias: Whether to train the bias of the classifier.
        execution_monitor: Function to monitor the execution of the model.
        primitives: list of primitive operations used in the DARTS network,
            e.g., 'add', 'subtract', 'none'. For details, see
            [`autora.theorist.darts.operations`][autora.theorist.darts.operations]
    """

    self.batch_size = batch_size

    self.num_graph_nodes = num_graph_nodes
    self.classifier_weight_decay = classifier_weight_decay
    self.darts_type = darts_type
    self.init_weights_function = init_weights_function

    self.param_updates_per_epoch = param_updates_per_epoch
    self.param_updates_for_sampled_model = param_updates_for_sampled_model

    self.param_learning_rate_max = param_learning_rate_max
    self.param_learning_rate_min = param_learning_rate_min
    self.param_momentum = param_momentum
    self.arch_momentum = arch_momentum
    self.param_weight_decay = param_weight_decay

    self.arch_updates_per_epoch = arch_updates_per_epoch
    self.arch_weight_decay = arch_weight_decay
    self.arch_weight_decay_df = arch_weight_decay_df
    self.arch_weight_decay_base = arch_weight_decay_base
    self.arch_learning_rate_max = arch_learning_rate_max
    self.fair_darts_loss_weight = fair_darts_loss_weight

    self.max_epochs = max_epochs
    self.grad_clip = grad_clip

    self.primitives = primitives

    self.output_type = output_type
    self.darts_type = darts_type

    self.X_: Optional[np.ndarray] = None
    self.y_: Optional[np.ndarray] = None
    self.network_: Optional[Network] = None
    self.model_: Optional[Network] = None

    self.train_classifier_coefficients = train_classifier_coefficients
    self.train_classifier_bias = train_classifier_bias

    self.execution_monitor = execution_monitor

    self.sampling_strategy = sampling_strategy

fit(X, y)

Runs the optimization for a given set of Xs and ys.

Parameters:

Name	Type	Description	Default
X	ndarray	independent variables in an n-dimensional array	required
y	ndarray	dependent variables in an n-dimensional array	required

Returns:

Name	Type	Description
self	DARTSRegressor	the fitted estimator

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def fit(self, X: np.ndarray, y: np.ndarray):
    """
    Runs the optimization for a given set of `X`s and `y`s.

    Arguments:
        X: independent variables in an n-dimensional array
        y: dependent variables in an n-dimensional array

    Returns:
        self (DARTSRegressor): the fitted estimator
    """

    if self.output_type == "class":
        raise NotImplementedError(
            "Classification not implemented for DARTSRegressor."
        )

    params = self.get_params()

    fit_results = _general_darts(X=X, y=y, network=self.network_, **params)
    self.X_ = X
    self.y_ = y
    self.network_ = fit_results.network
    self.model_ = fit_results.model
    return self

model_repr(input_labels=None, output_labels=None, output_function_label='', decimals_to_display=2, output_format='console')

Prints the equations of the model architecture.

Parameters:

Name	Type	Description	Default
input_labels	Optional[Sequence[str]]	which names to use for the independent variables (X)	None
output_labels	Optional[Sequence[str]]	which names to use for the dependent variables (y)	None
output_function_label	str	name to use for the output transformation	''
decimals_to_display	int	amount of rounding for the coefficient values	2
output_format	Literal['latex', 'console']	whether the output should be formatted for the command line (console) or as equations in a latex file (latex)	'console'

Returns:

Type	Description
str	The equations of the model architecture

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def model_repr(
    self,
    input_labels: Optional[Sequence[str]] = None,
    output_labels: Optional[Sequence[str]] = None,
    output_function_label: str = "",
    decimals_to_display: int = 2,
    output_format: Literal["latex", "console"] = "console",
) -> str:
    """
    Prints the equations of the model architecture.

    Args:
        input_labels: which names to use for the independent variables (X)
        output_labels: which names to use for the dependent variables (y)
        output_function_label: name to use for the output transformation
        decimals_to_display: amount of rounding for the coefficient values
        output_format: whether the output should be formatted for
            the command line (`console`) or as equations in a latex file (`latex`)

    Returns:
        The equations of the model architecture

    """
    assert self.model_ is not None
    fitted_sampled_network: Network = self.model_[0]

    if input_labels is None:
        input_labels_ = self._get_input_labels()
    else:
        input_labels_ = input_labels

    if output_labels is None:
        output_labels_ = self._get_output_labels()
    else:
        output_labels_ = output_labels

    edge_list = fitted_sampled_network.architecture_to_str_list(
        input_labels=input_labels_,
        output_labels=output_labels_,
        output_function_label=output_function_label,
        decimals_to_display=decimals_to_display,
        output_format=output_format,
    )

    model_repr_ = "\n".join(["Model:"] + edge_list)
    return model_repr_

predict(X)

Applies the fitted model to a set of independent variables X, to give predictions for the dependent variable y.

Parameters:

Name	Type	Description	Default
X	ndarray	independent variables in an n-dimensional array	required

Returns:

Name	Type	Description
y	ndarray	predicted dependent variable values

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def predict(self, X: np.ndarray) -> np.ndarray:
    """
    Applies the fitted model to a set of independent variables `X`,
    to give predictions for the dependent variable `y`.

    Arguments:
        X: independent variables in an n-dimensional array

    Returns:
        y: predicted dependent variable values
    """
    X_ = check_array(X)

    # First run the checks using the scikit-learn API, listing the key parameters
    check_is_fitted(self, attributes=["model_"])

    # Since self.model_ is initialized as None, mypy throws an error if we
    # just call self.model_(X) in the predict method, as it could still be none.
    # MyPy doesn't understand that the sklearn check_is_fitted function
    # ensures the self.model_ parameter is initialized and otherwise throws an error,
    # so we check that explicitly here and pass the model which can't be None.
    assert self.model_ is not None

    y_ = self.model_(torch.as_tensor(X_).float())
    y = y_.detach().numpy()

    return y

visualize_model(input_labels=None)

Visualizes the model architecture as a graph.

Parameters:

Name	Type	Description	Default
input_labels	Optional[Sequence[str]]	labels for the input nodes	None

Source code in temp_dir/darts/src/autora/theorist/darts/regressor.py

def visualize_model(
    self,
    input_labels: Optional[Sequence[str]] = None,
):
    """
    Visualizes the model architecture as a graph.

    Arguments:
        input_labels: labels for the input nodes

    """

    check_is_fitted(self, attributes=["model_"])
    assert self.model_ is not None
    fitted_sampled_network = self.model_[0]

    genotype = Network.genotype(fitted_sampled_network).normal
    (
        _,
        _,
        param_list,
    ) = fitted_sampled_network.count_parameters()

    if input_labels is not None:
        input_labels_ = tuple(input_labels)
    else:
        input_labels_ = self._get_input_labels()

    assert self.y_ is not None
    out_dim = 1 if self.y_.ndim == 1 else self.y_.shape[1]

    out_func = get_output_str(ValueType(self.output_type))

    # call to plot function
    graph = darts_model_plot(
        genotype=genotype,
        input_labels=input_labels_,
        param_list=param_list,
        full_label=True,
        out_dim=out_dim,
        out_fnc=out_func,
    )

    return graph